constrain.test.genotyping

Functions

concatenating_list_of_dfs(list_of_dfs)

Concatenating a list of daframes into one pd.dataframe by rows

pairwise_alignment_of_templates(reads, ...)

Infers relationship of templates to reads based on highest score from a pairwise alignment.

plat_seq_data_wrangler(sequencing_plates)

Makes list of Plate2Seq pd.DataFrames into numeric values and removes nan values.

plate_AvgQual(list_of_dfs_numeric[, ...])

Filters out rows that doesnt follow the criteria.

slicing_and_naming_seq_plates(sequencing_plates)

Slices rows of a list of dataframes and changes the names.

split_df_names(df_names_column[, ...])

Splits sample names from plate2seq pd.dataframes into plate and well columns